Transcription Factor
| Accessions: | 1bdt_A (3D-footprint 20231221), 1par_A (3D-footprint 20231221) |
| Names: | GENE-REGULATING PROTEIN ARC, RARC_BPP22, ARC REPRESSOR |
| Organisms: | Enterobacteria phage P22 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P03050 |
| Length: | 52 |
| Pfam Domains: | 4-52 Arc-like DNA binding domain |
| Sequence: (in bold interface residues) | 1 MKGMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIG |
| Interface Residues: | 4, 5, 9, 11, 13, 34, 35, 38 |
| 3D-footprint Homologues: | 1bdt_C, 3qoq_B, 1o4x_B |
| Binding Motifs: | 1bdt_ABCD TTaTAGAannnnTCTACcA 1par_ABCD TGTTAGAannnnTCTAyyA |
| Publications: | Schildbach J.F, Karzai A.W, Raumann B.E, Sauer R.T. Origins of DNA-binding specificity: role of protein contacts with the DNA backbone. Proceedings of the National Academy of Sciences of the United States of America 96:811-7 (1999). [Pubmed] Raumann B.E, Rould M.A, Pabo C.O, Sauer R.T. DNA recognition by beta-sheets in the Arc repressor-operator crystal structure. Nature 367:754-7 (1994). [Pubmed] |
| Related annotations: | PaperBLAST |
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