Transcription Factor
| Accessions: | T121358_1.02 (CISBP 1.02) |
| Names: | T121358_1.02;, TVAG_237720 |
| Organisms: | Trichomonas vaginalis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Myb/SANT |
| Length: | 198 |
| Pfam Domains: | 13-59 Myb-like DNA-binding domain 16-76 Myb-like DNA-binding domain 66-107 Myb-like DNA-binding domain 68-106 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MEAQNHPESKSTRQKFTAEEDARLIELVRIHGNKAWKKIASIMKTRTTRQCRERYINYLS 60 61 PSVTNGPWSAQEDSLLIEKVQEMGPKWSKIAKFFPSRSDVNIKNRYALFVSKGRAPALQT 120 121 LPREKHVTPEAKVPEQIPQQFVTPVSGTDSPVSNSSEMSMDELLDSLCNEEEDQAQVSFS 180 181 GSDPEAIDWNDNFDFSIF |
| Interface Residues: | 13, 47, 48, 49, 50, 52, 53, 57, 58, 59, 99, 100, 103, 104, 107, 108 |
| 3D-footprint Homologues: | 3osg_A, 1w0t_A, 2kdz_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A, 7xur_A, 8ity_W, 5n9g_C |
| Binding Motifs: | M1381_1.02 twrmCGcwrg |
| Related annotations: | PaperBLAST |
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