Transcription Factor

Accessions: T077372_1.02 (CISBP 1.02)
Names: LOC_Os09g31400, T077372_1.02;
Organisms: Oryza sativa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:EIN3
Length: 611
Pfam Domains: 38-419 Ethylene insensitive 3
Sequence: MDHLAIIATELGDSSDFEVEGIQNLTENDVSDEEIEAEDLARRMWKDRIKLRRIKERQDR
LALALQQAELDKSKGKPISDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGK
PVSGASDNIRAWWKEKVKFDKNGPAAIAKYESENLASADAPSSGIKSQHSLMDLQDATLG
SLLSSLMQHCDPPQRKYPLERGTPPPWWPSGNEDWWIALGLPRGQIPPYKKPHDLKKVWK
VGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVLSIDNGMSE
VTHHGALEYRNGDTHSSSNEYDVDGFEEAPLSTSSGDDEQDLSPAAQLSEEHAPTRRERA
KVKRPNQVVPKKAGTKEPPKRKRPRHSVTVIEQEVQRADDASEHSRNMIPDMNRLDQVEI
QGMANQITSFNEEANTSEALQHRGNTQELAHLPADFNHYGNAQATIATPVSICMRGQAVP
YESSDNSRPKTGNIFPQDSDSGFNNMPSSYQTIPPKQPLPLSIMEHHVVPLGIRTPADNS
PYSDQIIGSGNSTSVPGDMQLIDYPFYGEQDKFAGSSFAGLPLDYISISSPIPDIDDLLL
HDDDLMEYLGT
Binding Motifs: M0683_1.02 gaATGTAyCtr
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.