Transcription Factor

						

			
Accessions: T074734_1.02 (CISBP 1.02)

			
Names: FBXL19, T074734_1.02;
Organisms: Tetraodon nigroviridis
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:CxxC
Length: 636
Pfam Domains:     13-57 CXXC zinc finger domain
  378-431 F-box domain
  393-432 F-box-like
Sequence: 
(in bold interface residues)		   1 SKALGSGAGGGARRRRTRCRRCQACMRTECGECHFCKDMKKFGGPGRMKQSCLLRQCTAP   60
  61 VLPHTAVCFACGEAGKEDTVESADEKFSLSLMECTICNEIIHPSCLKMGKAEGIINDEIP  120
 121 NCWECPKCHQEGKTSKDQTDGSGKRRLDNGEVGRWKLTDDPPPKKKVPSSLEDVGRLDGG  180
 181 HKRKKEKDLPADSSRKKVKGAHEKRLKKVRCPRPWTCGGHKPKLEAAESSSPASSMGAGP  240
 241 GGPQGTSAAASQAGGGLGGTSSAEQRSHHREKLERFRRMCLLERRSSESDSESDSESDSL  300
 301 QAEPPGEARNGRTRGGGGREAGEKENASSVLTNHKHAAPGGGGAKVMKRSPPAVPSPPRP  360
 361 IQMERHLVRPPPACPEPSCLPLDSGSSHIMTRDVWLRVFTHLSQRELCVCMRVCRTWSRW  420
 421 CCDKRLWTRIDLSRRRSITPPMLSGIIRRQPVSLNLGHTNISKKQLMWLLSRLQGLVELN  480
 481 VSGVGWPVVSALCQVVCPCLRLLDLSRVEDLKDSHLRELLGPPPDPRTAHGETRAGRFQN  540
 541 VTELRLAGLGLTDASSRLLVRFVPHLTRLDLSQCGSITDQTLHTLTSPVSPLRDTLLYLN  600
 601 LAAGCVKVTEQCLPLLRRCSSLQTVDLRSCSLLSSE
Interface Residues: 45, 46, 47, 49, 50, 405, 406, 408, 409, 412, 518, 525, 530, 531, 534, 538
3D-footprint Homologues: 7z5a_A, 3qmd_A, 5u91_B, 7rhx_G, 3tq6_B, 3tmm_A
Binding Motifs: M0614_1.02 mgcGtaak
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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