Transcription Factor
| Accessions: | T107384_1.02 (CISBP 1.02) |
| Names: | T107384_1.02;, TVAG_183770 |
| Organisms: | Trichomonas vaginalis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:IBD |
| Length: | 230 |
| Pfam Domains: | 12-137 Transcription-initiator DNA-binding domain IBD |
| Sequence: (in bold interface residues) | 1 MSQPKFIELLSETDKKEYNNLRSTLSSNAVRNRRGKRLEAFSEVLTAIKNFCIKGDSDDW 60 61 KRCLVCGVCWLPEGIAINNRQFQVLIDKCKSSINGSLQKMGYGTIQSRQESIKLLSEHIP 120 121 FLATNYQEAREWSVRQFISVTPEPSVQTKQYKLIPHAFTPTPQPAVKANDQFYDPYDEYL 180 181 TNTHHNQEETKFDYSADFNDFQIDTSYNPFNEYDSYSLEQTFTGATNSTA |
| Interface Residues: | 53, 54, 58, 69, 71, 72, 73, 76, 80, 83, 160, 161, 165 |
| 3D-footprint Homologues: | 4xqk_A, 3jca_E, 8i54_A |
| Binding Motifs: | M1257_1.02 ccGrCCAmyy |
| Related annotations: | PaperBLAST |
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