footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	P25208 (JASPAR 2024)
Names:	CAAT box DNA-binding protein subunit B, NF-YB, NFYB_HUMAN, Nuclear transcription factor Y subunit beta
Organisms:	Homo sapiens
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	P25208
Length:
Binding Motifs:	MA0502.1 rmmysrrCCAATCAG MA0502.2 cyCATTGGCCar MA0502.3 yCATTGGCC
Binding Sites:	MA0502.1.1 MA0502.1.10 MA0502.1.11 MA0502.1.12 MA0502.1.13 MA0502.1.14 MA0502.1.15 MA0502.1.16 MA0502.1.17 MA0502.1.18 MA0502.1.19 MA0502.1.2 MA0502.1.20 MA0502.1.3 MA0502.1.4 MA0502.1.5 MA0502.1.6 MA0502.1.7 MA0502.1.8 MA0502.1.9 MA0502.2.1 MA0502.2.10 MA0502.2.11 / MA0502.2.8 MA0502.2.12 MA0502.2.13 MA0502.2.14 / MA0502.2.9 MA0502.2.10 / MA0502.2.15 MA0502.2.11 / MA0502.2.16 MA0502.2.12 / MA0502.2.17 MA0502.2.13 / MA0502.2.18 MA0502.2.19 MA0502.2.2 MA0502.2.20 MA0502.2.1 / MA0502.2.3 MA0502.2.4 MA0502.2.3 / MA0502.2.5 MA0502.2.4 / MA0502.2.6 MA0502.2.5 / MA0502.2.7 MA0502.2.6 / MA0502.2.8 MA0502.2.9 MA0502.2.14 MA0502.2.15 MA0502.2.16 MA0502.2.17 MA0502.2.18 MA0502.2.19 MA0502.2.2 MA0502.2.20 MA0502.2.7 MA0502.3.1 / MA0502.3.19 MA0502.3.10 / MA0502.3.13 / MA0502.3.9 MA0502.3.11 / MA0502.3.5 MA0502.3.12 MA0502.3.14 MA0502.3.15 MA0502.3.16 MA0502.3.17 MA0502.3.18 MA0502.3.2 / MA0502.3.7 MA0502.3.20 MA0502.3.3 / MA0502.3.6 MA0502.3.4 MA0502.3.8
Publications:	Bi W, Wu L, Coustry F, de Crombrugghe B, Maity S.N. DNA binding specificity of the CCAAT-binding factor CBF/NF-Y. The Journal of biological chemistry 272:26562-72 (1997). [Pubmed]
Related annotations:	PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.