Transcription Factor

						

			
Accessions: GABP1_MOUSE (HOCOMOCO 10)

			
Names: GA-binding protein subunit beta-1, GABP subunit beta-1, GABP subunit beta-2, GABP1_MOUSE, GABPB-1, GABPB-2
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Uniprot: Q00420
Length: 383
Pfam Domains:    10-101 Ankyrin repeats (3 copies)
    38-69 Ankyrin repeat
   68-132 Ankyrin repeats (3 copies)
    72-99 Ankyrin repeat
   72-116 Ankyrin repeats (many copies)
   72-101 Ankyrin repeat
   72-101 Ankyrin repeats (many copies)
  105-131 Ankyrin repeat
  105-156 Ankyrin repeats (many copies)
  105-133 Ankyrin repeat
  105-143 Ankyrin repeats (many copies)
Sequence: 
(in bold interface residues)		   1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRA   60
  61 GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV  120
 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT  180
 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVV  240
 241 TAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPA  300
 301 TDIAEETVISEEPPAKRQCMEIIESRVECAEIEEREALQKQLDEANREAQKYRQQLLKKE  360
 361 QEAEAYRQKLEAMTRIQTNKEAV
Interface Residues: 15, 16, 37, 48, 365, 368, 369
3D-footprint Homologues: 8ipp_B, 3a01_E
Binding Motifs: GABP1_MOUSE.H10MO.C|M01115 cMGGAAGtgv
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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