Transcription Factor
| Accessions: | T119979_1.02 (CISBP 1.02) |
| Names: | NCU03416, T119979_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Myb/SANT |
| Length: | 1146 |
| Pfam Domains: | 275-505 Telomere repeat binding factor (TRF) |
| Sequence: (in bold interface residues) | 1 MADLNFSAAIEANLLAALSKHTEEAKSPASTPTPAPAPGPAPVPTPTPPSIPTQGASAPP 60 61 PQPVQQQPQQAQQPPLNHSLQSSQGPPSQTAQPPQQQLSQASSLSHALQQALQSSNPPSY 120 121 QTPSTPQPQPSSTTTAAPISQPLVQVPLPQPSPHAVSNVPPQASPALTEPPKRSHSPDPQ 180 181 DSNGKRPKLEHVDEMDQDIPFDIKAALATALGDFEKQHSQIGNDSSLENPSGPSSAPPPA 240 241 LAVSLSATATPMPEKCGDKLMKASSNSTYMIRSMSLPVLGNLAVQILLRLSQQPRNETLS 300 301 LLSETDAEFRKHYDLLTESFKLARKGFSDSPVLLPDELEINDSEDRETVRVANLATTAIS 360 361 VFGANDVACKDLDDSFFSIFVPEDGEFKDTLADLLLSLKTQAFLDSLDEQATPQQVTEQL 420 421 DKFFPDNFEDWLKQRNLDVVTDTDADQLAVKIKDRRELLSTLANSEQPKKSKYPPDTFPE 480 481 TLCAFLQSHIGVVVEYAEEYGVKIPISEEPIAPESIVSDPIQNGNNVQDEHADLAALLQS 540 541 KIVENGELKDFHAGNLHNEASVSADDNFDLSKLIEQSLPDHINGLKDGLLEQNGQGESSG 600 601 LFDTKDLASLIAEKLNDNLGTPVDGLSNVPQNYEDTMRENHGQVHPQYHNINQLQTPTYQ 660 661 QYPPASSSNIGMGTTGETLPPNQSCPTSVLYEKARQAAVAKSSSTTRREGLHSTRRPWTP 720 721 DEEKALMMGLDMVKGPHWSQILSLFGAHGSVSDILKDRTQVQLKDKARNLKLFFLKTNSE 780 781 MPYYLQSVTGELKTRAPGQAARKEAEEKARLNAEDEQARLAGIMTLGGLHNNHHPVAGSP 840 841 IAPSPARAHTATPGPGTGHLNGTPTPTPTQGPTNQPAALAPVPISPMVKTEPVDHSAHQV 900 901 GNLPQIQPAPAPQSLQPALKPQSQPQPLHQQQSQPHLQQHPQANAQQHSQQHLQQHSQPL 960 961 QPLRPQQQPQQLAQSQMRSQTPQALAPAPPQQYHHQQQHHQPQGQQQHQQLHQQQQLHPG 1020 1021 SQQHEQTQPQPQPQVQAQPPPPQQQQQHHVAPAPASTSTTTTATPAIAAAQPHVHVAAAE 1080 1081 PAAASSTLSNQATPSFGLPPIPPNHHSTPDQAQDVKLFETLQAAIGATSPAHESHQAATV 1140 1141 PETSAG |
| Interface Residues: | 715, 753, 756, 757, 758, 759, 760, 761, 764, 765, 768 |
| 3D-footprint Homologues: | 1w0t_A, 7c4r_A |
| Binding Motifs: | M1368_1.02 wrCCCTAr |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.