Transcription Factor
Accessions: | HSF1_MOUSE (HOCOMOCO 10) |
Names: | Heat shock factor protein 1, Heat shock transcription factor 1, HSF 1, HSF1_MOUSE, HSTF 1 |
Organisms: | Mus musculus |
Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
Length: | 525 |
Pfam Domains: | 17-120 HSF-type DNA-binding 246-525 Vertebrate heat shock transcription factor |
Sequence: (in bold interface residues) | 1 MDLAVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY 60 61 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVT 120 121 SVSTLKSEDIKIRQDSVTRLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHA 180 181 QQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLSDSNSAHSVPKYGRQYSLEHVHGPGPY 240 241 SAPSPAYSSSSLYSSDAVTSSGPIISDITELAPTSPLASPGRSIDERPLSSSTLVRVKQE 300 301 PPSPPHSPRVLEASPGRPSSMDTPLSPTAFIDSILRESEPTPAASNTAPMDTTGAQAPAL 360 361 PTPSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLTSHGFSVDTSALLDLFSPSVTM 420 421 PDMSLPDLDSSLASIQELLSPQEPPRPIEAENSNPDSGKQLVHYTAQPLFLLDPDAVDTG 480 481 SSELPVLFELGESSYFSEGDDYTDDPTISLLTGTEPHKAKDPTVS |
Interface Residues: | 62, 63, 68, 70, 71, 72, 74, 75, 117 |
3D-footprint Homologues: | 5hdn_C, 3hts_B, 5d5v_B, 5d5w_B, 7dci_A |
Binding Motifs: | HSF1_MOUSE.H10MO.A|M01150 rGAArrttCyaGAA |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.