Transcription Factor
Accessions: | P08047 (JASPAR 2024) |
Names: | SP1_HUMAN |
Organisms: | Homo sapiens, Rattus norvegicus |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Uniprot: | P08047 |
Length: | |
Binding Motifs: | MA0079.2 CCCCkCCCCC MA0079.3 gCCCCkCCCCy MA0079.4 ywrRCCACGCCCmCh MA0079.1 krGGsdkKGW MA0079.5 GGGGMGGrG |
Binding Sites: | MA0079.1.5 MA0079.1.6 MA0079.1.7 MA0079.1.3 MA0079.1.2 MA0079.1.8 MA0079.1.4 MA0079.1.1 MA0079.2.1 MA0079.2.10 MA0079.2.11 MA0079.2.12 MA0079.2.13 MA0079.2.14 MA0079.2.15 MA0079.2.16 MA0079.2.17 MA0079.2.18 MA0079.2.19 MA0079.2.2 MA0079.2.20 MA0079.2.3 MA0079.2.4 MA0079.2.5 MA0079.2.6 MA0079.2.7 MA0079.2.8 MA0079.2.9 MA0079.3.1 MA0079.3.10 MA0079.3.11 MA0079.3.12 MA0079.3.13 MA0079.3.14 MA0079.3.15 MA0079.3.16 MA0079.3.17 MA0079.3.18 MA0079.3.19 MA0079.3.2 MA0079.3.20 MA0079.3.3 MA0079.3.4 MA0079.3.5 MA0079.3.6 MA0079.3.7 MA0079.3.8 MA0079.3.9 |
Publications: | Thiesen H.-J., Bach C. Target detection assay (TDA): a versatile procedure to determine DNA binding sites as demonstrated on SP1 protein. Nucleic Acids Res. 18:3203-3209 (1990). [Pubmed] Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed] Raiber EA, Kranaster R, Lam E, Nikan M, Balasubramanian S. A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro. Nucleic Acids Res 40:1499-508 (2012). [Pubmed] |
Related annotations: | PaperBLAST |
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