Transcription Factor
| Accessions: | Q94513 (JASPAR 2024) |
| Names: | Boundary element associated factor, Boundary element-associated factor of 32kD, isoform B, Boundary element-associated factor of 32kD, isoform C, LD44361p, Q94513_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q94513 |
| Length: | 282 |
| Pfam Domains: | 7-58 BED zinc finger 236-271 BESS motif |
| Sequence: (in bold interface residues) | 1 MPKGRVSNVWQHYDINEECENFAICRYCGNNISRGGMASNLKGNNTTNLWTHLRHKHRDE 60 61 VLVSPVQQRPQARMIPIIKKDKTVRITKAKTLREPLRVAKPKIESNVANYLGEAGALPQK 120 121 WEEYEQNDEISEDIKDIIYSEDPLCYSPIHVMDDEGLDQPEKQVTVLTHSTSPAGGSSRP 180 181 IGVGSGVQATVVASTSSSSSSAKQLKNNLETSIERLTAVSEQLSYIIQQNHEELTKDDDY 240 241 YFALSLVPAMRHLSLSRKMYVRSKIQDILFKESEDSTLAKDE |
| Interface Residues: | 126, 136 |
| 3D-footprint Homologues: | 6ceu_B |
| Binding Motifs: | MA0529.1 kcrmarmtATCGATw MA0529.2 rmTATCGATAky MA0529.3 TATCGATA |
| Binding Sites: | MA0529.3.9 MA0529.1.1 MA0529.1.10 MA0529.1.11 MA0529.1.12 MA0529.1.13 MA0529.1.14 MA0529.1.15 MA0529.1.16 MA0529.1.17 MA0529.1.18 MA0529.1.19 MA0529.1.2 MA0529.1.20 MA0529.1.3 MA0529.1.4 MA0529.1.5 MA0529.1.6 MA0529.1.7 MA0529.1.8 MA0529.1.9 MA0529.2.1 MA0529.2.10 MA0529.2.11 MA0529.2.12 MA0529.2.13 MA0529.2.14 MA0529.2.15 MA0529.2.16 MA0529.2.17 MA0529.2.18 MA0529.2.19 MA0529.2.2 MA0529.2.20 MA0529.2.3 MA0529.2.4 MA0529.2.5 MA0529.2.6 MA0529.2.7 MA0529.2.8 MA0529.2.9 MA0529.3.1 MA0529.3.10 MA0529.3.11 / MA0529.3.12 / MA0529.3.19 / MA0529.3.20 / MA0529.3.7 / MA0529.3.8 MA0529.3.13 MA0529.3.14 MA0529.3.15 MA0529.3.16 MA0529.3.17 / MA0529.3.5 MA0529.3.18 / MA0529.3.6 MA0529.3.2 MA0529.3.3 MA0529.3.4 |
| Publications: | Yang J, Ramos E, Corces V.G. The BEAF-32 insulator coordinates genome organization and function during the evolution of Drosophila species. Genome research 22:2199-207 (2012). [Pubmed] |
| Related annotations: | PaperBLAST |
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