Transcription Factor

Accessions: F7CEN4 (JASPAR 2024)
Names: F7CEN4_MONDO
Organisms: Monodelphis domestica
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: F7CEN4
Length: 683
Pfam Domains: 435-445 AT hook motif
500-544 PHD-finger
Sequence:
(in bold interface residues)
1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
61 NLIVKQEQPDKFQIQPLSQSENKLATAQQQPPPPPLPPLPSLPQQQQQQQQYHHQQQPAA 120
121 PSPNLTAPTQKTVTTASMITTKTLPLVLKAATATMPASVVAQRPTIAMVTAINSQKAVLS 180
181 PDVQSTPVNLQTSSKVPGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNF 240
241 LPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTSLPTSQNSIHPVRVVNGQ 300
301 TATIAKTFPMAQLTSIVIAAPGARLAGPQTVQLSKPSLEKQTIKSHTETEEKPAESRTIT 360
361 PPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERK 420
421 KSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPASPPSSHPDSPENERTESTFTYPAP 480
481 VQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP 540
541 KCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQL 600
601 SSSISKCMEMKNNILARQKEMHGSLEKVKQLIRLIHGIDLSKPMNSEAGLAAVPNGPDCT 660
661 PAAPVPAPSPGCTLNCNKGEETK
Interface Residues: 81, 82, 560, 561, 564, 565
3D-footprint Homologues: 2i3q_A, 8k8c_A
Binding Motifs: UN0270.1 aawAwATwAATw
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.