Transcription Factor
| Accessions: | T105296_1.02 (CISBP 1.02) |
| Names: | ceh-18, T105296_1.02; |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain,POU |
| Length: | 417 |
| Pfam Domains: | 304-377 Pou domain - N-terminal to homeobox domain |
| Sequence: (in bold interface residues) | 1 MNTLENTFQFLAEVFEANGGCLVTERVSPSLSGASKRKSRPVKRIITEDEVIPEEEVVEE 60 61 EEEEKVEQPSEEVTCPAMQVDATDAILASLRQIANNDLSEHCIREDEGNTSAEVFSNGNG 120 121 EDMEQAGLAGTDLLRRVADMLQGNHNGSLNSHFLQQQFAAFKVDPTPVSTNGNGLLTPIT 180 181 TQLSPLFTSTDAFNSPEKLLQAIMTPSLGFLGANGLGKKHILKIKFYWVISGASNSGLLS 240 241 SPLIAPSPTLLQSLMNTPTQPTASLTPKKAENRPPVVSQTLKASKRRLFDDTSRIEAASM 300 301 SGDDRIDMNELEAFAQTFKKQRIKFGFTQGDVGVALGKRYGTDFSQTTISRFEALNLSFK 360 361 NMCKLRPLLKEWLADVEMAIEGGATVTDLIDKKTIHNGNHHTIHHVDVSSLNFRVIT |
| Interface Residues: | 320, 329, 345, 346, 347, 348, 350, 351, 357, 361, 399 |
| 3D-footprint Homologues: | 4h5q_B, 7u0g_M, 3d1n_M, 8bx1_A, 8g87_X, 1o4x_A, 2xsd_C, 7xrc_C, 1au7_A, 1e3o_C |
| Binding Motifs: | M1244_1.02 TGCATAwT |
| Related annotations: | PaperBLAST |
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