Transcription Factor

Accessions: AtMYB63 (AthaMYB 1.0)
Names: At1g79180, AtMYB63, Myb domain protein 63, MYB transcription factor, Putative transcription factor (MYB63
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q6R0A6
Length: 295
Pfam Domains: 16-63 Myb-like DNA-binding domain
19-78 Myb-like DNA-binding domain
69-114 Myb-like DNA-binding domain
72-125 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGKGRAPCCDKTKVKRGPWSPEEDIKLISFIQKFGHENWRSLPKQSGLLRCGKSCRLRWI 60
61 NYLRPDLKRGNFTSEEEETIIKLHHNYGNKWSKIASQLPGRTDNEIKNVWHTHLKKRLAQ 120
121 SSGTADEPASPCSSDSVSRGKDDKSSHVEDSLNRETNHRNELSTSMSSGGSNQQDDPKID 180
181 ELRFEYIEEAYSEFNDIIIQEVDKPDLLEIPFDSDPDIWSFLDTSNSFQQSTANENSSGS 240
241 RATTEEESDEDEVKKWFKHLESELGLEEDDNQQQYKEEESSSSSLLKNYELMIH*
Interface Residues: 16, 51, 52, 53, 54, 56, 57, 61, 62, 103, 104, 107, 108, 111, 112, 113, 143, 144, 146
3D-footprint Homologues: 3osg_A, 1w0t_A, 2kdz_A, 7xur_A, 1mse_C, 3zqc_A, 6kks_A, 7yoj_A
Binding Motifs: AtMYB63_I RhhAGTTR
AtMYB63_II GbTwGkTR
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
ATTAGTTG
GCTTGTTG
GGTAGGTG
GGTTGGTG
GTCAGTTA
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.