Transcription Factor
| Accessions: | T049196_1.02 (CISBP 1.02) |
| Names: | Egr2, T049196_1.02; |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 412 |
| Pfam Domains: | 36-126 Domain of unknown function (DUF3446) 279-303 C2H2-type zinc finger 279-303 Zinc finger, C2H2 type 296-319 Zinc-finger double domain 309-331 C2H2-type zinc finger 309-331 Zinc finger, C2H2 type 323-347 Zinc-finger double domain 337-355 C2H2-type zinc finger 337-359 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MINIDMTGEKRPLDLPYPSSFAPISAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSA 60 61 GILQGVTPPASTTASSSVTSASPNPLATGPLGVCTMSQTQPELDHLYSPPPPPPPYSGCT 120 121 GDLYQDPSAFLSPPSTTSTSSLAYQPPPSYPSPKPAMDPGLIPMIPDYPGFFPSPCQRDP 180 181 HGAAGPDRKPFPCPLDSLRVPPPLTPLSTIRNFTLGGPGAGVTGPGASGGGEGPRLPGSG 240 241 SAAVTATPYNPHHLPLRPILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHI 300 301 RIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHL 360 361 RQKERKSSAPSAPPSAQSSASGPGGSQAGGSLCGNSAIGGPLASCTSRTRTP |
| Interface Residues: | 180, 205, 209, 245, 246, 248, 258, 261, 265, 268, 270, 271, 291, 292, 293, 294, 295, 297, 298, 317, 319, 320, 321, 322, 323, 325, 326, 327, 344, 347, 348, 349, 350, 351, 352, 353, 354, 355, 358, 381, 382, 383, 393, 396 |
| 3D-footprint Homologues: | 7w1m_H, 8ssq_A, 5kkq_D, 8ssu_A, 6blw_A, 1tf6_A, 5ei9_F, 2kmk_A, 1tf3_A, 6jnm_A, 7n5w_A, 1ubd_C, 5k5i_A, 7ysf_A, 6u9q_A, 4x9j_A, 2gli_A, 1f2i_J, 5kl3_A, 2wbs_A, 2jpa_A, 1g2f_F, 6ml4_A, 5v3j_F, 8h9h_G, 6e94_A, 2lt7_A, 6a57_A, 2drp_D, 3uk3_C, 8cuc_F, 7y3l_A, 7txc_E, 1llm_D, 5yel_A, 4m9v_C, 7y3m_I, 8gn3_A, 7ej7_B, 5yj3_D |
| Binding Motifs: | M0416_1.02 tgCGKGGGcg |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.