Transcription Factor
| Accessions: | T137200_1.02 (CISBP 1.02) |
| Names: | Minc10479, T137200_1.02; |
| Organisms: | Meloidogyne incognita |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Pipsqueak |
| Length: | 252 |
| Pfam Domains: | 121-159 helix-turn-helix, Psq domain |
| Sequence: (in bold interface residues) | 1 MIHKKGENLKAKENDSGEHLETSLAVKQQQQQQLDVLIPSASTSLTVNGTSVPAITAETL 60 61 FKELTSQLGQFVGQANNIEQLANCIPTEPQCDFDLEKYQEFDPKCKGKRQKRGQYRKYNK 120 121 DALDRAVTAVRNGEMSVHRAGSHFGVPHSTLEYKVKERNLMRIKSKKQHGLLRLPPVLTA 180 181 SSDASGSVQQQHQQNSQYSFQNNNSNGEGYKNAEEEEESCSPVTGEVQNLLGTMLKSLVS 240 241 AASANNRGNNLC |
| Interface Residues: | 39, 40, 47, 187, 191, 201, 203, 205, 206 |
| 3D-footprint Homologues: | 1p71_B, 4yhx_A |
| Binding Motifs: | M1513_1.02 aAAwTTsGGc |
| Related annotations: | PaperBLAST |
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