Transcription Factor
| Accessions: | T074170_1.02 (CISBP 1.02) |
| Names: | BGIBMGA008956, T074170_1.02; |
| Organisms: | Bombyx mori |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:CxC |
| Length: | 1295 |
| Pfam Domains: | 291-328 Tesmin/TSO1-like CXC domain 369-408 Tesmin/TSO1-like CXC domain 1002-1179 SPFH domain / Band 7 family |
| Sequence: (in bold interface residues) | 1 MPRQVPIAPKPRLSQTTKPKTTFGPGKQYAIAPKPVTFVMNKNTKKVSVAGVQANSKGNA 60 61 VLAQIGKQLVMVPAEGAQKIKLVSAGSGATLQYVRANSDQAQLTPAKAAGTTQAKPLVAK 120 121 VVVQVTVKPDRKLVRIAPLTSKSGAAATQPTPARPPQSLLAPLSPALVKREPEPATRPRR 180 181 RQARPARPRAARQPGGILLYALGQIMGENADSMDNSTGNNVEHPLIVIPNFQHEEYDDRE 240 241 IVYEQDIKTSINMHESKTLVELEPEIVYSPPKTSPSPDNDVGATELGLRPRKACNCTKSQ 300 301 CLKLYCDCFANGEFCNQCNCNNCHNNLENEALRQKAIRACLERNPNAFSKFHRPKIGKAK 360 361 IGGPDIIRRHNKGCNCKRSGCLKNYCECYEAKIACTAMCKCVGCRNVQELVERRRDMRLR 420 421 TQDSDSTFRPALLGQPKHPCTFMTMEVIEAVCQCLVAAAVERRDDSPRDAPRDSPRDAPR 480 481 DALGDVLEEFARCLHEIIGASHHDSLLLDVSRYIDGSRSRVKLVKTRSMELKAAFKFNFE 540 541 CWNSVHIHLFRYLIAAKALKAGETILSDAPFVVGPNADTSLVCFDCYCPLISKFNVCKNC 600 601 ALVPICPGDGCPEAFSKSECLTISISYNVTTKNAGRDDDPPKTSPSPDNEWHNSFECEQL 660 661 KRLKLTAGLNPMTMVRNVGSLLVLRTILKRNVDHEAWNEFMQLETHLEARRGTDLWDLYE 720 721 NTVKFIQSLGLLECENDKNLVQKICAAIDVNSFEVRGPSVPGIGCGETLRGVYLQAALLA 780 781 HDCVGNTHMSIGDDNLLVCHASVDINIGDIIYYNYTDALKGTDVRQQHLLIGKYFKCTCS 840 841 RCMDITEVGTYMSSAMCPECKFGYVSRTSLQEWTCKDCGKEFKHSDVERKVACCTAKLQT 900 901 INKNDERELEEYIRNVSLVLAPNHYLLLDAKQRLAGLLRDIINREPRPTKKLIRRKLGLC 960 961 EEMLPVLEKLCPGISRIKAIPLYEMHAAIVQLATRMFHSREINGSEYLGGALLPVTSQAG 1020 1021 FHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVVNKLDPQSVLDMVRNFT 1080 1081 AEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDLHEMAPGLRVQAV 1140 1141 RVTKPKIPESIRKNYELMEAEKSKLLIAAQHQKVVEKEAETARRKAIIEAEKEAHVAKIQ 1200 1201 YEQKIMEKESLQKIELIEDSIHKAKQQTKAEADFYHLKKQAEANKLLLTREYLELKKYEA 1260 1261 LSNNNKIYFGSDIPNMFLQANVGESVPILKGVKVE |
| Interface Residues: | 305, 385, 873, 875, 876, 877, 884 |
| 3D-footprint Homologues: | 5fd3_A, 5deu_A |
| Binding Motifs: | M0597_1.02 wTTTAAATT |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.