Transcription Factor

						

			
Accessions: T100374_1.02 (CISBP 1.02)

			
Names: eve, T100374_1.02;
Organisms: Sarsia sp. Long Island Sound
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 272
Pfam Domains:    99-153 Homeobox domain
Sequence: 
(in bold interface residues)		   1 MSLRKFSIDYLLNDKTGSRNFDSKIIENDSLEHDNYNNYKSNNTETRERLTSGFSIQNER   60
  61 ASVSEVNIDKQSYEKVTADNQGYDKDVVNEYDDSQQHGTRTAFTRTQLSRLEKEFTKESY  120
 121 ISRTRRVELANELCLPENTIKVWFQNRRMKSKRRRLGYNRYYSPTYFPYYSMTPYLTPQQ  180
 181 TSRVSCSCCYKLDRTVTKEQYISTDYLSNPKNHTSAFHHHKSATTSAFHHHKSATTSQFH  240
 241 QHKSASTSPFHQNRHQYGERYLSLREPKLKYQ
Interface Residues: 97, 98, 100, 138, 139, 141, 142, 145, 146, 148, 149, 150, 153
3D-footprint Homologues: 3cmy_A, 3d1n_M, 1fjl_B, 2lkx_A, 6m3d_C, 2hdd_A, 9b8u_A, 1ig7_A, 5zjt_E, 4cyc_A, 2r5y_A, 8ik5_C, 7psx_B, 5hod_A, 2hos_A, 1jgg_B, 8ejp_B, 6a8r_A, 1puf_A, 8osb_E, 7q3o_C, 5jlw_D, 3lnq_A, 2ld5_A, 8eml_B, 1au7_A, 6es3_K, 4xrs_G, 3a01_E, 8pmf_A, 5zfz_A, 3rkq_B, 1nk2_P, 1b72_A, 5flv_I, 2xsd_C, 1e3o_C, 1le8_A, 7xrc_C, 8bx1_A, 1o4x_A, 1du0_A, 4qtr_D, 1zq3_P, 8g87_X
Binding Motifs: M1180_1.02 acTAATTAcm
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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