Transcription Factor

Accessions: UP00481A (UniPROBE 20160601)
Names: AGS2, HJCYS, hN2, notch 2, NOTCH2
Organisms: Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Description: notch 2: Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBP-J kappa and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptot
Length: 377
Pfam Domains: 125-172 Ankyrin repeat
153-230 Ankyrin repeats (3 copies)
169-208 Ankyrin repeats (many copies)
175-203 Ankyrin repeat
175-206 Ankyrin repeat
178-218 Ankyrin repeats (many copies)
194-249 Ankyrin repeats (many copies)
237-304 Ankyrin repeats (3 copies)
241-273 Ankyrin repeat
262-315 Ankyrin repeats (many copies)
274-306 Ankyrin repeat
277-328 Ankyrin repeats (many copies)
286-363 Ankyrin repeats (3 copies)
309-333 Ankyrin repeat
309-338 Ankyrin repeat
Sequence: KRKHGSLWLPEGFTLRRDASNHKRREPVGQDAVGLKNLSVQVSEANLIGTGTSEHWVDDE
GPQPKKVKAEDEALLSEEDDPIDRRPWTQQHLEAADIRRTPSLALTPPQAEQEVDVLDVN
VRGPDGCTPLMLASLRGGSSDLSDEDEDAEDSSANIITDLVYQGASLQAQTDRTGEMALH
LAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAADAQGVFQILIRNRVTDLDARMN
DGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLLLLKNGAN
RDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITDHMDRLPRDVARDRMHHDIVRLL
DEYNVTPSPPGTVLTSA
Binding Motifs: UP00481A_1 tmkrmaycvTGGGAAccmbdwkg
UP00481A_2 cwckwwwsCrTGGGAAmhwktkd
Binding Sites: GCGTGGGA
AGTTCCCA
ATGGGAAA
ATGGGAAC
ATTCCCAC
CATGGGAA
CCGTGGGA
CCTGGGAA
CGTGAGAA
CGTGGGAA
CGTGGGAG
CTGGGAAC
CTTTCCCA
GCTCCCAC
GGTGGGAA
GGTTCCCA
GTGGGAAA
GTGGGAAC
GTTTCCCA
TATGGGAA
TGGGAAAA
TGTGGGAA
Publications: Del Bianco C, Vedenko A, Choi SH, Berger MF, Shokri L, Bulyk ML, Blacklow SC. Notch and MAML-1 complexation do not detectably alter the DNA binding specificity of the transcription factor CSL. PLoS One : (2010). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.