Transcription Factor

						

			
Accessions: 6mrj_D (3D-footprint 20231221)

			
Names: Nickel-responsive regulator, NIKR_HELPY
Organisms: Helicobacter pylori, Helicobacter pylori (strain ATCC 700392 / 26695)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: O25896
Length: 138
Pfam Domains:      7-45 Ribbon-helix-helix protein, copG family
   60-137 NikR C terminal nickel binding domain
Sequence: 
(in bold interface residues)		   1 KDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKI   60
  61 AVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQL  120
 121 EIGGLRGVKFAKLTKASS
Interface Residues: 7, 9, 11, 27, 32, 34, 35, 38, 39, 43, 60, 72
3D-footprint Homologues: 6mrj_D, 8epx_D, 5h3r_A
Binding Motifs: 6mrj_ABCD TTAnTACtnnnnnnnnnnnAGTGtTAy
6mrj_D TTAnTAT
Binding Sites: 6mrj_L
6mrj_M
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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