Transcription Factor
| Accessions: | T08971 (AthalianaCistrome v4_May2016) |
| Names: | AT2G40260, T08971; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:G2-like |
| Length: | 410 |
| Pfam Domains: | 84-135 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MRSSSQNSENSKTCLSNNIKATTKNEEDKDEEDDEEGEEDEEERSGDQSPSSNSYEEESG 60 61 SHHHDQNKKNGGSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVK 120 121 GLSIAHVKSHLQMYRSKKTDEPNEGDQGFSFEHGAGYTYNLSQLPMLQSFDQRPSSSLGY 180 181 GGGSWTDHRRQIYRSPWRGLTTRENTRTRQTMFSSQPGERYHGVSNSILNDKNKTISFRI 240 241 NSHEGVHDNNGVAGAVPRIHRSFLEGMKTFNKSWGQSLSSNLKSSTATIPQDHIATTLNS 300 301 YQWENAGVAEGSENVLKRKRLLFSDDCNKSDQDLDLSLSLKVPRTHDNLGECLLEDEVKE 360 361 HDDHQDIKSLSLSLSSSGSSKLDRTIRKEDQTDHKKRKISVLASPLDLTL |
| Interface Residues: | 84, 124, 125, 128, 129, 132, 133 |
| 3D-footprint Homologues: | 7d3t_D, 8xas_E, 6j5b_C, 6qec_A |
| Binding Motifs: | M0392 twwwwAyATTCyyTt M0379 warawwwwwwaAyATTCyyT |
| Related annotations: | PaperBLAST |
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