Transcription Factor

Accessions: 5bmz_A (3D-footprint 20231221), 5bmz_B (3D-footprint 20231221), 5bmz_C (3D-footprint 20231221), 5bmz_D (3D-footprint 20231221)
Names: HcaR protein, Q7X0D9_ACIAD, Repressor protein, Repressor protein of the Hydroxycinnamate (Hca
Organisms: Acinetobacter baylyi, strain ATCC 33305 / BD413 / ADP1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q7X0D9
Length: 139
Pfam Domains: 30-87 MarR family
30-87 MarR family
33-96 Winged helix DNA-binding domain
38-77 Winged helix-turn-helix DNA-binding
Sequence:
(in bold interface residues)
1 EEEPRLSYMIARVDRIISKYLTEHLSALEISLPQFTALSVLAAKPNLSNAKLAERSFIKP 60
61 QSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLNQCNQVVQQLEAQMLQGVDI 120
121 NLAFLIRNNLELMVKNLST
Interface Residues: 49, 50, 59, 60, 61, 62, 64, 65, 69, 82, 86
3D-footprint Homologues: 5trd_B, 7el3_B, 1z9c_A, 5h3r_A, 5hlg_E, 5hso_A
Binding Motifs: 5bmz_AB ATnTCAGnnnAAcTGAnAT
5bmz_B ACTGAnAT
5bmz_CD ATnTCAGtnnaGCTGA
Binding Sites: 5bmz_E / 5bmz_F / 5bmz_G / 5bmz_H
Related annotations: PaperBLAST

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