Transcription Factor

						

			
Accessions: T08179 (AthalianaCistrome v4_May2016)

			
Names: At2g38090, T08179;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:MYB-related
Length: 298
Pfam Domains:     28-73 Myb-like DNA-binding domain
  142-186 Myb-like DNA-binding domain
  143-191 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MNRGIEVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLP   60
  61 GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFS  120
 121 AAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVA  180
 181 SHAQKYFIRQVNGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSPPSVGGNQRET  240
 241 SEWEGQTLYDETAAAFYNQNAFSETLLGMSSTPYMAKLQEQSFLNASQFESYNAYLQM
Interface Residues: 18, 140, 175, 177, 178, 181, 233, 234
3D-footprint Homologues: 1mse_C, 1vfc_A, 2kdz_A, 5ciy_A
Binding Motifs: M0625 aaardwwwrGATAAgraTrrd
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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