Transcription Factor
| Accessions: | ODO1 (EEADannot 2025-01-07) |
| Names: | Q50EX6 |
| Organisms: | Petunia x hybrida |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Tryptophan cluster factors MYB |
| Length: | 294 |
| Pfam Domains: | 14-61 Myb-like DNA-binding domain 17-77 Myb-like DNA-binding domain 71-115 Myb-like DNA-binding domain 71-111 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNY 60 61 LRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120 121 IDPVTHEPLKKEANLSDQPTTESDQNKENGHQQVQVVPQSTNVTAAAATSTEFDNNSSFS 180 181 SSASSSENSSCTTDESKLVFDNLSENDPLLSCLLEADTPLIDSPWEFPMSSTTTVEEPKS 240 241 FDSIISNMTSWEDTFNWLSGYQEFGINDFGFDNCFNHVELDIFKTIDNVENRHG |
| Interface Residues: | 37, 47, 48, 49, 50, 51, 52, 54, 55, 59, 60, 80, 81, 83, 84, 87, 88, 102, 103, 105, 106, 109, 110 |
| 3D-footprint Homologues: | 2e1c_A, 2kdz_A, 7xur_A, 7dvv_A, 7c4r_A |
| Binding Motifs: | EEAD0088 CMCCwaCCm |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.