Transcription Factor
| Accessions: | UP00526A (UniPROBE 20160601) |
| Names: | Fkh19, Foxn1, Hepatocyte nuclear factor 3 forkhead homolog 11, Hfh11, Whn, Winged-helix transcription factor nude |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 129 |
| Pfam Domains: | 16-107 Fork head domain |
| Sequence: (in bold interface residues) | 1 IAPQANAEGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGW 60 61 KNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPSKIDKMQEELQKWKRKDPIAVRKSM 120 121 AKPEELDSL |
| Interface Residues: | 59, 61, 62, 63, 65, 66, 67, 69, 70, 79, 87 |
| 3D-footprint Homologues: | 7vox_H, 2hdc_A, 2c6y_A, 7yzg_A, 7tdw_A, 3g73_A, 7yz7_A, 6el8_A, 7tdx_A, 3l2c_A, 7yzb_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 3qrf_G |
| Binding Motifs: | UP00526A_1 akcCramAsCGCGTCAYsgwmyw UP00526A_2 akcrwssACGCGCrcAgtytbaa UP00526A_3 csvvwrkGACGCGttGymtsskt UP00526A_4 smhrhaaAbyGACGCCawwwyhw |
| Binding Sites: | ACCACGCG ACGCGTCA CCACGCGC CGCGCGTC ACCGCGTC ACGCGCTG AGCGCGTC AGCGCGTG ATCGCGTC ATGACGCG CCGACGCG CCGCGTCG CGACGCGC CGCGTCAC CGCGTCCC GACGCGCA GCGCGTCA GCGCGTCC GCGCGTGA TCGCGTCA |
| Publications: | Nakagawa S, Gisselbrecht SS, Rogers JM, Hartl DL, Bulyk ML. DNA-binding specificity changes in the evolution of forkhead transcription factors. Proc Natl Acad Sci U S A 110:12349-54 (2013). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.