Transcription Factor
| Accessions: | T027927_1.02 (CISBP 1.02) |
| Names: | T027927_1.02;, xbp-1 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bZIP |
| Length: | 287 |
| Pfam Domains: | 61-120 bZIP transcription factor 61-113 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MSNYPKRIYVLPARHVAAPQPQRMAPKRALPTEQVVAQLLGDDMGPSGPRKRERLNHLSQ 60 61 EEKMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENERLRRQNKNLMNQ 120 121 QNESVMYMEENNENLMNSNDACIYQNVVYEEEVVGEVAPVVVVGGEDRRAFESAAFINEP 180 181 QQWEQARSTSINNNISNQLRRMDSKKNNTISVDMYLTIISILCNHMDRNKKMDTSNKSSN 240 241 ISRAQAESSIDSLLATLRKEQTVMQRLVQADPCTHLQKRVKHFRRIP |
| Interface Residues: | 67, 68, 71, 72, 74, 75, 78, 79, 187 |
| 3D-footprint Homologues: | 7x5e_F, 1nwq_C, 6mg1_B, 5t01_B, 5vpe_D, 5ht2_B |
| Binding Motifs: | M0340_1.02 takawkACGTGta |
| Related annotations: | PaperBLAST |
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