Transcription Factor

Accessions: T07475 (AthalianaCistrome v4_May2016)
Names: AT2G15740, T07475;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:C2H2
Length: 329
Sequence:
(in bold interface residues)
1 MSSMPNKFNPHCDDNNRGFSSIQMNQNSQMVHSRFITSDHTNHGDLFSSSPSFSCFHNSH 60
61 ASSSSFGFQNSHVENHMMKRNIISDDNYFSITNNPHFTRVSFTQTITNKFTAIVPTNTLD 120
121 AVQYDAQRVKRAMNPKTNIWNPIFSPPNTFDKQCEFLNPKPLNVIFPSQNSAYPQHLDMF 180
181 SLSSKHNHDQRVLQDGRSMKKILKPTIFFEATTDYIESQENEKSNNDHNDGRTHSLPYEK 240
241 YGPYTCPKCNGVFNTSQKFAAHMSSHYKNETSEEREQRIRAKNKRKFCKLNREINGEPQK 300
301 TKQEDVANNSEKSDDKTFQHLVVVKEELV
Interface Residues: 227, 229, 230, 232, 233, 247, 250, 254, 255, 256, 257, 258, 261
3D-footprint Homologues: 6ml4_A, 7wnh_D, 3cbb_A, 7xvn_C, 6l6q_B, 2han_A, 2wbs_A, 7y3l_A
Binding Motifs: M0317 rwCGrygaCGw
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.