Transcription Factor

Accessions: O23063 (JASPAR 2024)
Names: Probable transcription factor At4g00390, STKLP_ARATH, Storekeeper-like protein At4g00390
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 364
Pfam Domains: 156-247 Protein of unknown function, DUF573
Sequence:
(in bold interface residues)
1 MTKKLDPPTAPSSDEDDVETSEDDSSSSEEDEPIKSLPATTAAAPAKSTAVSAATPAKST 60
61 SVSAAAPSKSTAVSAAADSDSGSESETDSDSESTDPPKSGSGKTIASKKKDDPSSSTATL 120
121 ALPAVKSGAKRAASEAATTSTKRVKKDEESVKKPALFQRLWSDDDEISMLQGMIDYHADT 180
181 GKSPSADTNAFYEFQKKSISFEVSKSQFSDKVRSLRKKYRAKEGKDEPRFVKAHDKKAFE 240
241 LSKFIWGPKGIALDSNAKSNGVSKKSASKTKEKLDSVKQDLAFVGVSSTNGDDWFEKSSL 300
301 ARMIAGSGIDEYYVRQKWSSFTLETKKIVEEKFQLMQAKELEAMLDKSVRLTDLTSYFVD 360
361 ASKN
Interface Residues: 207, 209, 210, 213
3D-footprint Homologues: 8b4b_W
Binding Motifs: UN0392.1 raCCGGTCrrcc
UN0392.2 aCCGGTC
Related annotations: PaperBLAST

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