Transcription Factor

Accessions: 1k6o_B (3D-footprint 20231221)
Names: Serum response factor, SRF_HUMAN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P11831
Length: 85
Pfam Domains: 13-63 SRF-type transcription factor (DNA-binding and dimerisation domain)
Sequence:
(in bold interface residues)
1 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 60
61 FATRKLQPMITSETGKALIQTCLNS
Interface Residues: 4, 7, 8, 19, 22, 23, 27
3D-footprint Homologues: 1hbx_A, 1n6j_A, 1c7u_A, 7x1n_C, 1mnm_A
Binding Motifs: 1k6o_ABC AGGATnTCCATATTAGGA
1k6o_B TATGGA
Binding Sites: 1k6o_D
1k6o_E
Publications: Mo Y, Ho W, Johnston K, Marmorstein R. Crystal structure of a ternary SAP-1/SRF/c-fos SRE DNA complex. Journal of molecular biology 314:495-506 (2001). [Pubmed]
Related annotations: PaperBLAST

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