Transcription Factor
| Accessions: | O49067 (JASPAR 2024) |
| Names: | LG2_MAIZE, Protein LIGULELESS 2, Protein TGACG (TGA, Transcription factor LG2 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | O49067 |
| Length: | 531 |
| Pfam Domains: | 220-263 Basic region leucine zipper 221-250 bZIP transcription factor 301-378 Seed dormancy control |
| Sequence: (in bold interface residues) | 1 MVQGEESSWRMERAALPLNQALAYGVQAHAAAAAAPPTCFLDFQPAAASAAYFGFGELEE 60 61 ALIHGGGAASAGGGVDPGVIIKNDVAQAKSAAGYLAGAGTGRPPTLEIFPSWPMRHQQQL 120 121 HSGNSQSVGSTGTDSSSAQNTMSQMELVSPASSAPRQEVMMVTTDDYSYKPGLAAAPAAA 180 181 APPSFQQHHPLPLQLHGGEGGGDHDKRKHGSTRKDGKLVDAKTERRLAQNREAARKSRLR 240 241 KKAYVQQLETSRIRLQQVEHELQRARSQGLFVGGCSAAGDMSSGAAMFDMEYARWLDDDT 300 301 KRLAELRGGLQAHLLDGNLGLIVEECMQHYDELFQLKAALARSDVFHLLTGSWATPAERC 360 361 FFWMGGFRPSELLKILIPQLDPLTEQQLLGICNLQQSSEQAEEALAQGLHQLHQSLADTV 420 421 AAGTLNDGAAAPNYMNIMAVALEKLASLENFYQQADNLRHQTLHQMRRILTTRQAARCFL 480 481 SIGEYYSRLRALSNLWASRPRDNFIGTESLSPTATELQALHHQQQNQFAGF |
| Interface Residues: | 230, 231, 233, 234, 237, 238 |
| 3D-footprint Homologues: | 5vpe_D, 1dh3_C, 2dgc_A, 5t01_B |
| Binding Motifs: | MA1835.1 yacGTACGTACgy MA1835.2 GTACGTAC |
| Binding Sites: | MA1835.2.10 / MA1835.2.13 / MA1835.2.14 / MA1835.2.15 / MA1835.2.16 / MA1835.2.18 / MA1835.2.19 / MA1835.2.20 / MA1835.2.3 / MA1835.2.4 / MA1835.2.9 MA1835.1.1 MA1835.1.10 / MA1835.1.12 MA1835.1.11 / MA1835.1.13 MA1835.1.12 / MA1835.1.14 MA1835.1.13 / MA1835.1.14 / MA1835.1.15 / MA1835.1.16 MA1835.1.15 / MA1835.1.17 / MA1835.1.4 / MA1835.1.6 MA1835.1.16 / MA1835.1.18 / MA1835.1.3 / MA1835.1.5 MA1835.1.17 / MA1835.1.20 MA1835.1.18 MA1835.1.19 MA1835.1.2 MA1835.1.20 MA1835.1.5 / MA1835.1.7 MA1835.1.6 / MA1835.1.8 MA1835.1.7 / MA1835.1.9 MA1835.1.10 / MA1835.1.8 MA1835.1.11 / MA1835.1.9 MA1835.2.5 / MA1835.2.8 MA1835.2.6 / MA1835.2.7 MA1835.2.12 / MA1835.2.2 MA1835.2.1 / MA1835.2.11 MA1835.2.17 MA1835.1.19 MA1835.1.3 MA1835.1.4 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] |
| Related annotations: | PaperBLAST |
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