Transcription Factor
| Accessions: | Q3UY88 (JASPAR 2024) |
| Names: | Double homeobox B-like 1, Double homeobox B-like 2, Double homeobox B-like 3, Double homeodomain-related protein, Q3UY88_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 201 |
| Pfam Domains: | 15-70 Homeobox domain 95-140 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MELSCSTGLLEKEARRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMT 60 61 WFQKHRKIRKQAEFACCSEESQEQEQDKPRVKEARRSRTHFTKFQTDILIEAFEKNRFPG 120 121 IVTREKLAQQTGIPESRIHVRCASLCLWQPTCPYHKPLFSRAVDGQSQATHGCPCALDTG 180 181 CKYLVFPATVWRNSHIRPAES |
| Interface Residues: | 15, 16, 18, 59, 60, 63, 64, 65, 67, 68, 69, 71, 78, 81, 95, 96, 97, 98, 140 |
| 3D-footprint Homologues: | 3d1n_M, 1ig7_A, 5zfz_A, 1nk2_P, 6es3_K, 5hod_A, 3l1p_A, 1puf_B, 1au7_A, 3a01_E, 2hdd_A, 7q3o_C, 4xrs_G, 3rkq_B, 2hos_A, 5flv_I, 4qtr_D, 4xrm_B, 1b72_A, 1du0_A, 8g87_X, 1fjl_B, 3cmy_A, 6a8r_A, 2lkx_A, 6m3d_C, 3lnq_A, 1jgg_B |
| Binding Motifs: | PH0026.1 yrAccYAATCAAcgrws |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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