Transcription Factor
| Accessions: | T099791_1.02 (CISBP 1.02) |
| Names: | NCU03593, T099791_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 615 |
| Pfam Domains: | 79-133 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MATDIINQETLAPPSMKQEAPSPTSSMTPLPTPTSTSCPKDSVSPSPSTPANGNKNHNQS 60 61 SASRRPPRKSTLTQQQKNQKRQRATQDQLTTLEMEFNKNPTPTATVRERIAEEINMTERS 120 121 VQIWFQNRRAKIKLLAKKSLESGEDMDSIPESMRQYLAIQAMESGKGLGYFGRTGLLPYG 180 181 HQGMLGGEQGGQGKVLIHHLTCKSLTIGKWMRVSQNSMDLIIFYSPDKCTMTYYINNEQE 240 241 GYKIEYPFSYIKNIYLNNGDGDHMGGITIELLHPPLFFMDAAGQASGFFQVGDFTEDQQA 300 301 SSVLTHHLGGNPKILSGQLAKLVSLEAFMHRHSPNHMFQEMHHPMALSAPVSPARPSSQP 360 361 NFAQPHVGMFQENQWGINVHQNNNMMMRGGPGHKRQRSRSVPGPIDFQTLQMLQQPPSFH 420 421 ITQPEHQQAPVHNPQIFAPIPQQPNMLGPLNPNLRIDTQAGFGSVDMRQYPMSATTAPHS 480 481 PAGFNSPNYFAPPDNGNMAGSFTPYSATFSPMINPSSLGVPPPSISPLSFDHPAIMSESP 540 541 PMSMPPICEGSAISDDGSTHDMYQPGKHSYTLPMHPHSPFAEPNQAEMELNQYMDLKHFD 600 601 VDPASLSPESIHHTQ |
| Interface Residues: | 57, 58, 61, 77, 78, 79, 80, 81, 82, 83, 84, 119, 120, 122, 123, 126, 127, 130, 131, 133, 134 |
| 3D-footprint Homologues: | 5zfz_A, 3a01_E, 3d1n_M, 1puf_A, 1zq3_P, 6m3d_C, 6es3_K, 7q3o_C, 2ld5_A, 2h1k_B, 1fjl_B, 3cmy_A, 1mnm_C, 1b72_A, 5jlw_D, 3rkq_B, 2r5y_A, 1ig7_A, 2hos_A, 4cyc_A, 1jgg_B, 3l1p_A, 5zjt_E, 6wig_A, 5hod_A, 3lnq_A, 2lkx_A, 6a8r_A, 2hdd_A, 7psx_B, 1puf_B, 1nk2_P, 1au7_A, 2xsd_C, 7xrc_C, 1e3o_C, 4j19_B, 1le8_A, 4xrs_G, 1du0_A, 5flv_I, 1o4x_A, 8g87_X, 4qtr_D |
| Binding Motifs: | M1114_1.02 tbyaatww |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.