Transcription Factor
| Accessions: | B6TYT8 (JASPAR 2024) |
| Names: | AP2-EREBP transcription factor, B6TYT8_MAIZE, Ethylene-responsive transcription factor 4 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | B6TYT8 |
| Length: | 203 |
| Pfam Domains: | 17-67 AP2 domain |
| Sequence: (in bold interface residues) | 1 MAPKRPVSAAAAAEQPRLRGVRKRPWGRYAAEIRDPVRKARVWLGTFDTPEQAARAYDAA 60 61 ARKLRGPGAATNYPAPEPTAEALAEAPAASGSGSAVVYESSSASASASSCSLPLAAPSLD 120 121 LSLALPAAAAAAEPYQLFADPAAAAAVTPALLHFLPPKSEEQQSYSGSSSLSSSSSSVVF 180 181 DAAPPVGLRLDLNLALPPAEMVM |
| Interface Residues: | 22, 24, 25, 26, 30, 32, 34, 39, 41, 43 |
| 3D-footprint Homologues: | 7wq5_A, 1gcc_A, 5wx9_A, 7et4_D |
| Binding Motifs: | MA1833.1 cgCcGCCGCCGCCrcc MA1833.2 CcGCCGCCGCC |
| Binding Sites: | MA1833.2.11 / MA1833.2.12 / MA1833.2.13 / MA1833.2.14 / MA1833.2.3 / MA1833.2.4 MA1833.2.19 MA1833.2.17 / MA1833.2.20 MA1833.1.1 MA1833.1.10 / MA1833.1.12 MA1833.1.11 / MA1833.1.13 MA1833.1.12 / MA1833.1.13 / MA1833.1.14 / MA1833.1.15 / MA1833.1.4 / MA1833.1.5 MA1833.1.14 / MA1833.1.16 MA1833.1.15 / MA1833.1.17 MA1833.1.16 / MA1833.1.18 MA1833.1.17 / MA1833.1.20 MA1833.1.18 MA1833.1.19 MA1833.1.2 / MA1833.1.3 MA1833.1.20 MA1833.1.3 / MA1833.1.4 MA1833.1.5 / MA1833.1.6 MA1833.1.6 MA1833.1.7 MA1833.1.8 MA1833.1.9 MA1833.1.1 MA1833.1.10 MA1833.1.11 MA1833.1.19 MA1833.1.2 MA1833.1.7 MA1833.2.1 MA1833.2.10 MA1833.2.15 MA1833.2.16 MA1833.2.18 MA1833.2.2 MA1833.2.5 MA1833.2.6 MA1833.2.7 MA1833.2.8 MA1833.2.9 |
| Publications: | Buettner M., Singh K. B. Arabidopsis thaliana ethylene-responsive element binding protein (AtEBP), an ethylene-inducible, GCC box DNA-binding protein interacts with an ocs element binding protein. Proc. Natl. Acad. Sci. USA 94:5961-5966 (1997). [Pubmed] |
| Related annotations: | PaperBLAST |
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