Transcription Factor

						

			
Accessions: T138260_1.02 (CISBP 1.02)

			
Names: NFATC1, T138260_1.02;
Organisms: Monodelphis domestica
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Rel
Length: 877
Pfam Domains:   362-522 Rel homology domain (RHD)
Sequence: 
(in bold interface residues)		   1 PCHDLQTSNPVISVVPSTNHPSGYGGSIDSGTSGYYLSSNIRPNGAPALESPRIEITSYL   60
  61 GLHHNNNQFFHDADVEETIPNSKRSPSTATLNLPNIEAYRDPSCLSPASSLSSRSCNSEA  120
 121 SSYESNYSYPYTSPQTSPWQSPCVSPKTTDPEEGYTRGMVACNLLNSPRHSPSTSPRTSI  180
 181 TEENWLSTRNSRPSSPCNKRKYNLNGRQTSYSPHHSPTPSPQNSPRVSVTDETWLGNTNQ  240
 241 YTSSAIVAAINALTTDSTIDMNDGIPIKSRKTALEHTPSMTLKIEPAGEDHGTISPTSDL  300
 301 SPEEFSSFQHIRKGNFCDQYLSVPQHPYQWAKPKPLSPTSYMSPSLPALDWQLPSHSGPY  360
 361 ELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLFIGTADDRLL  420
 421 RPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIEL  480
 481 RKGETDIGRKNTRVRLVFRVHIPQSNGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSY  540
 541 PVVGGKKMILSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSLVVEIPPFRNQ  600
 601 RITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPTDDYEPAQTCGPMNQGLNPLS  660
 661 KPYYSQQIMMPPDPGSCLVAGFTSCQQRNTVMSSSPNSSPKLHDLSSSTYNKCITNPGHS  720
 721 HLGLQQPAGGVPTIQEVPRSIVVHPSSPDQSSHIMLQPQVSQHLSSSCSLGYQQTLYPNS  780
 781 PSSPVPSVTQESTYLQSCSPTHSSIMGQHQHQLSKVQRNESPTNQPLSLPELHEDSNHNL  840
 841 APIPVTIKREPEELDQLYLDDVNEIIRNDLSSTNVHA
Interface Residues: 373, 375, 376, 378, 379, 382, 472, 489, 523, 524, 616, 617
3D-footprint Homologues: 1p7h_L, 1a66_A, 1imh_C
Binding Motifs: M1521_1.02 wwtTTCCryt
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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