Transcription Factor

						

			
Accessions: T000702_1.02 (CISBP 1.02)

			
Names: CRF3, T000702_1.02;
Organisms: Arabidopsis thaliana
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:AP2
Length: 354
Pfam Domains:   123-173 AP2 domain
Sequence: 
(in bold interface residues)		   1 MDEYIDFRPLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDF   60
  61 LFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSG  120
 121 QIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF  180
 181 SIPPQEEEEEEEPEPVIEEKPVIMTTPTPTTSSSESTEEDLQHLSSPTSVLNHRSEEIQQ  240
 241 VQQPFKSAKPEPGVSNAPWWHTGFNTGLGESDDSFPLDTPFLDNYFNESPPEMSIFDQPM  300
 301 DQIFCENDDIFNDMLFLGGETMNIEDELTSSSIKDMGSTFSDFDDSLISDLLVA
Interface Residues: 129, 131, 133, 137, 139, 141, 148, 150
3D-footprint Homologues: 1gcc_A, 5wx9_A, 7wq5_A
Binding Motifs: M0041_1.02 scGCCgcca
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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