Transcription Factor
| Accessions: | hb (FlyZincFinger 1.0 ) |
| Names: | CG9786 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 523 |
| Pfam Domains: | 20-42 Zinc-finger double domain 48-73 Zinc-finger double domain |
| Sequence: (in bold interface residues) | 1 KMKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQK 60 61 PFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKYGHKPGMVL 120 121 DEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQSQPAQPVA 180 181 TSQLSAALQGFPLVQGNSAPPAASPVLPLPASPAKSVASVEQTPSLPSPANLLPPLASLL 240 241 QQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYER 300 301 KSVDSAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKGRVLKLDTL 360 361 LQLRSEAMTSPEQLKVPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQANTS 420 421 ASSTASSSGNSSNASSNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAIYECKYCDIFFK 480 481 DAVLYTIHMGYHSCDDVFKCNMCGEKCDGPVGLFVHMARNAHS |
| Interface Residues: | 16, 17, 18, 19, 21, 22, 25, 43, 44, 45, 46, 47, 48, 50, 51, 53, 54, 57, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 83, 100, 101, 102, 103, 104, 105, 106, 107, 108, 110, 111, 112 |
| 3D-footprint Homologues: | 5yel_A, 8ssu_A, 5ei9_F, 8ssq_A, 7w1m_H, 5v3j_F, 2lt7_A, 5kkq_D, 8cuc_F, 7y3l_A, 7n5w_A, 3uk3_C, 5k5l_F, 6u9q_A, 4x9j_A, 1llm_D, 8gn3_A, 6jnm_A, 7txc_E, 5k5i_A, 6ml4_A, 8h9h_G, 6e94_A, 7y3m_I, 7ysf_A, 1g2f_F, 6blw_A, 5kl3_A, 6a57_A, 2jpa_A, 1f2i_J, 2wbs_A, 5yj3_D, 4m9v_C, 1tf3_A |
| Binding Motifs: | hb_FlyReg_FBgn0001180 tTTTTTrt hb_NAR_FBgn0001180 CAAAAAAAmm hb_SANGER_2.5_FBgn0001180 ksskTTTTTTAyk hb_SOLEXA_5_FBgn0001180 kkykTTTTTTr |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.