Transcription Factor

Accessions: TCF4_DBD (HumanTF 1.0)
Names: Beta-catenin-interacting protein 1, CNBP1_HUMAN, Inhibitor of beta-catenin and Tcf-4, TCF4
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Uniprot: Q9NSA3
Notes: Ensembl ID: ENSG00000196628; DNA-binding domain sequence; TF family: bHLH; Clone source: MGC
Length: 131
Pfam Domains: 34-87 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MALDDDKKDIKSITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMV 60
61 QLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLA 120
121 GPHPGMGDASN
Interface Residues: 35, 38, 39, 41, 42, 43, 45, 46
3D-footprint Homologues: 2ypa_A, 7z5k_B, 6g1l_A, 6od3_F, 2ql2_D, 2ypa_B, 2ql2_A
Binding Motifs: TCF4_DBD yrCACCTGbw
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Related annotations: PaperBLAST

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