Transcription Factor

						

			
Accessions: T060531_1.02 (CISBP 1.02)

			
Names: FBgn0263239, T060531_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 751
Pfam Domains:   680-701 Zinc-finger double domain
  694-718 Zinc finger, C2H2 type
  711-734 Zinc-finger double domain
  724-746 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 MHTDIIIGDQFAANNNYWVMQSPELDYRHELMGRLHKIEPADVELEVLAAAAAAANNNNN   60
  61 TSSNNNHSSNSSSNNSNGSQTPNGNNNSSLATGGHQHHQFHHHLHHHHSHQHHHQHHHLH  120
 121 QHHSHSLQSGESGASEAWPHLPAPSYASDVPHAQQQQLQPAGSPNSNSNGAYGCAPLYDG  180
 181 APYEVALGYGGAVVASTGGATSSDKEYLYETKNKEALYADPLDDPYQRPVLWDDITTSIQ  240
 241 NIDPENALMLSSSGSSNNNGSSNSSSNTGESATSQLPQVKMEAIDESLLETFSTPLLSPL  300
 301 EIKTEKQQRQQQHQHQQQQQQQQQQQQQHQQQHQQQYQQQHYQQHYQQQHLYQHHPSLAL  360
 361 PGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQQQYASQLVSG  420
 421 SGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQ  480
 481 QQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAA  540
 541 AAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQ  600
 601 QQPQQQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEK  660
 661 RRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTG  720
 721 AKPFKCIVCERSFARSDHLALHMKRHLPKNK
Interface Residues: 406, 408, 409, 411, 412, 419, 421, 643, 644, 646, 649, 653, 660, 668, 676, 677, 678, 679, 680, 682, 683, 684, 685, 686, 689, 706, 707, 708, 709, 710, 711, 712, 713, 714, 717, 734, 735, 736, 737, 738, 739, 740, 741, 745
3D-footprint Homologues: 4hf1_A, 8ssu_A, 8ssq_A, 7w1m_H, 5kkq_D, 7ysf_A, 6ar1_A, 3uk3_C, 7n5w_A, 6jnm_A, 5v3j_F, 1tf3_A, 6ml4_A, 4x9j_A, 1g2f_F, 5kl3_A, 1ubd_C, 5ei9_F, 2kmk_A, 2gli_A, 6blw_A, 1tf6_A, 6u9q_A, 8h9h_G, 4m9v_C, 6e94_A, 7y3m_I, 2lt7_A, 6a57_A, 2jpa_A, 5k5i_A, 7y3l_A, 8cuc_F, 8gn3_A, 1llm_D, 2drp_D, 7txc_E, 5yel_A, 1f2i_J, 2wbs_A, 5yj3_D
Binding Motifs: M4811_1.02 gtGGGTGTGGY
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.