Transcription Factor

						

			
Accessions: T107694_1.02 (CISBP 1.02)

			
Names: IRF5, T107694_1.02;
Organisms: Oryctolagus cuniculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:IRF
Length: 488
Pfam Domains:    14-122 Interferon regulatory factor transcription factor
  237-420 Interferon-regulatory factor 3
Sequence: 
(in bold interface residues)		   1 MNQPAPGAPPPPRRVRLKPWLVAQVNSCQYPGLQWVNGERRFFYIPWRHATRHGPSQDGD   60
  61 NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV  120
 121 CSNGPTATESQPADEYYVGPGEEEEEEDEELQRMLPGLCITDPVPSGPAPPPYSFPKEDI  180
 181 KWPPAVQPPVLPGPLPPDDGLELQLLPEVLQSVQPGPPAGEQFLPDLLVNPHMLPLTDLE  240
 241 IKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPVSLEQVRFPSPEDIPSDKQR  300
 301 FYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHGSRPNPIQREVKTKLFS  360
 361 LEYFLNELILFQKGQTHAPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS  420
 421 GELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPVPQAPAVAAGLGAGQAPW  480
 481 PMHPVGMQ
Interface Residues: 49, 51, 84, 88, 89, 91, 92, 95, 96
3D-footprint Homologues: 2o61_A, 2pi0_B, 1if1_B, 2irf_L, 7oot_B
Binding Motifs: M1269_1.02 ahCGAAACyr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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