Transcription Factor
| Accessions: | T057779_1.02 (CISBP 1.02) |
| Names: | sug, T057779_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 384 |
| Pfam Domains: | 185-207 Zinc-finger double domain 196-218 Zinc finger, C2H2 type 210-237 Zinc-finger double domain 243-266 Zinc-finger double domain 254-280 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MDIIQKSIFNSGPHSRGIYEPPLGYFTPYNTPPYIAAYSDSGSWLADHHQHHQQQHQQHQ 60 61 QQMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKARGQQDELCRSPVEFPDDSKSCSSSS 120 121 ECGTASDFVCNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNAR 180 181 YKMLVHTRTHTKEKPHRCHLCEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSD 240 241 RFKHTRTHSMEKPYMCKVAGCQKRYTDPSSLRKHVKTFKHSIHLIASQPLTLPSVPCLLE 300 301 ASSESAFTCLPAASSVESTSSSSSARYYDDSNNEPSDYSLKPKQDAEFSPSYWLGDRQHS 360 361 YLHSEDFFVKMDVESPLDLRIHRI |
| Interface Residues: | 141, 143, 144, 147, 151, 178, 179, 180, 181, 182, 185, 187, 188, 191, 206, 207, 208, 209, 210, 212, 213, 214, 217, 236, 237, 238, 239, 240, 241, 242, 243, 244, 266, 267, 268, 269, 270, 272, 273, 277 |
| 3D-footprint Homologues: | 5yel_A, 5kkq_D, 8ssq_A, 5v3j_F, 1tf6_A, 8ssu_A, 8cuc_F, 7n5w_A, 3uk3_C, 1g2f_F, 4x9j_A, 2gli_A, 5ei9_F, 6ml4_A, 8h9h_G, 5k5i_A, 6e94_A, 1ubd_C, 2jpa_A, 7w1m_H, 7y3l_A, 6jnm_A, 1tf3_A, 6blw_A, 2kmk_A, 6u9q_A, 1llm_D, 5kl3_A, 1f2i_J, 7ysf_A, 4m9v_C, 2lt7_A, 7y3m_I, 6a57_A, 5yj3_D, 2wbs_A, 7txc_E |
| Binding Motifs: | M5219_1.02 CcgyGGGGGGyckk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.