Transcription Factor
| Accessions: | AL2G40550.t1 (EEADannot 2026-03-04) |
| Names: | WRKY40 |
| Organisms: | Arabidopsis lyrata |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:GCM domain factors WRKY |
| Length: | 302 |
| Pfam Domains: | 145-204 WRKY DNA -binding domain |
| Sequence: (in bold interface residues) | 1 MDQYSSSLVDTSLDLTIGVTRMRVEEDPPTSALVEELKRVSAENKKLSEMLTLMYDNYNV 60 61 LRKQLMEYVNKSNITERDQSSPPKKRKSPAREDAFSSAVIGGVSESSSTDQDEYLCKKQR 120 121 EETVVKEKVSRVYYKTESSDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVK 180 181 KKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRYISHGGSASTPAAANRRSSLTEP 240 241 VTTVDLTESKKVTSPTSRIDFPEVQKLLVEQMASSLTKDPNFTAALAAAVTGKLYQQNHT 300 301 EK |
| Interface Residues: | 152, 153, 154, 156, 157, 168 |
| 3D-footprint Homologues: | 6j4e_B, 6j4f_F, 6j4g_B, 6ir8_A, 7z0u_A |
| Binding Motifs: | EEAD0585 rGTCAAmr |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.