Transcription Factor
| Accessions: | T093313_1.02 (CISBP 1.02) |
| Names: | T093313_1.02;, ZFHX2 |
| Organisms: | Homo sapiens |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 2572 |
| Pfam Domains: | 566-595 C2H2 type zinc-finger (2 copies) 1247-1280 C2H2 type zinc-finger (2 copies) 1598-1652 Homeobox domain 1858-1914 Homeobox domain 2066-2122 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MATLNSASTTGTTPSPGHNAPSLPSDTFSSSTPSDPVTKDPPAASSTSENMRSSEPGGQL 60 61 LESGCGLVPPKEIGEPQEGPDCGHFPPNDPGVEKDKEQEEEEEGLPPMDLSNHLFFTAGG 120 121 EAYLVAKLSLPGGSELLLPKGFPWGEAGIKEEPSLPFLAYPPPSHLTALHIQHGFDPIQG 180 181 FSSSDQILSHDTSAPSPAACEERHGAFWSYQLAPNPPGDPKDGPMGNSGGNHVAVFWLCL 240 241 LCRLGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFLEPKLPARP 300 301 SSDIPLDNSSTVNMEANVAQTEDGPPEAEVQALILLDEEVMALSPPSPPTATWDPSPTQA 360 361 KESPVAAGEAGPDWFPEGQEEDGGLCPPLNQSSPTSKEGGTLPAPVGSPEDPSDPPQPYR 420 421 LADDYTPAPAAFQGLSLSSHMSLLHSRNSCKTLKCPKCNWHYKYQQTLDVHMREKHPESN 480 481 SHCSYCSAGGAHPRLARGESYNCGYKPYRCDVCNYSTTTKGNLSIHMQSDKHLANLQGFQ 540 541 AGPGGQGSPPEASLPPSAGDKEPKTKSSWQCKVCSYETNISRNLRIHMTSEKHMQNVLML 600 601 HQGLPLGLPPGLMGPGPPPPPGATPTSPPELFQYFGPQALGQPQTPLAGPGLRPDKPLEA 660 661 QLLLNGFHHVGAPARKFPTSAPGSLSPDAHLPPSQLLGSSSDSLPTSPPPDDSLSLKVFR 720 721 CLVCQAFSTDSLELLLYHCSIGRSLPEAEWKEVAGDTHRCKLCCYGTQLKANFQLHLKTD 780 781 KHAQKYQLAAHLREGGGAMGTPSPASLGDGAPYGSVSPLHLRCNICDFESNSKEKMQLHA 840 841 RGAAHEENSQIYKFLLDMEGAEAGAELGLYHCLLCAWETPSRLAVLQHLRTPAHRDAQAQ 900 901 RRLQLLQNGPTTEEGLAALQSILSFSHGQLRTPGKAPVTPLAEPPTPEKDAQNKTEQLAS 960 961 EETENKTGPSRDSANQTTVYCCPYCSFLSPESSQVRAHTLSQHAVQPKYRCPLCQEQLVG 1020 1021 RPALHFHLSHLHNVVPECVEKLLLVATTVEMTFTTKVLSAPTLSPLDNGQEPPTHGPEPT 1080 1081 PSRDQAAEGPNLTPEASPDPLPEPPLASVEVPDKPSGSPGQPPSPAPSPVPEPDAQAEDV 1140 1141 APPPTMAEEEEGTTGELRSAEPAPADSRHPLTYRKTTNFALDKFLDPARPYKCTVCKESF 1200 1201 TQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTVCRVSYNQS 1260 1261 STLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEGEVGTEKKGPDTSGFISGL 1320 1321 PFLSPPPPPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLPFYLHDLKVGPKLTL 1380 1381 AGPAPVLSLPAATPPPPPQPPKAELAEREWERPPMAKEGNEAGPSSPPDPLPNEAARTAA 1440 1441 KALLENFGFELVIQYNEGKQAVPPPPTPPPPEALGGGDKLACGACGKLFSNMLILKTHEE 1500 1501 HVHRRFLPFEALSRYAAQFRKSYDSLYPPLAEPPKPPDGSLDSPVPHLGPPFLVPEPEAG 1560 1561 GTRAPEERSRAGGHWPIEEEESSRGNLPPLVPAGRRFSRTKFTEFQTQALQSFFETSAYP 1620 1621 KDGEVERLASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFS 1680 1681 CVFELVRHLKKCYDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPD 1740 1741 GEELSQAEATKAGGKEPEEKATPSPSPAHTCDQCAISFSSQDLLTSHRRLHFLPSLQPSA 1800 1801 PPQLLDLPLLVFGERNPLVAATSPMPGPPLKRKHEDGSLSPTGSEAGGGGEGEPPRDKRL 1860 1861 RTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERKGQFRST 1920 1921 PGGVPSPAVKPPATATPASLPKFNLLLGKVDDGTGREAPKREAPAFPYPTATLASGPQPF 1980 1981 LPPGKEATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLAE 2040 2041 PESPGAGGTSGGPGGGTGVPDGMGQRRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGE 2100 2101 EIGLPKRVIQVWFQNARAKEKKAKLQGTAAGSTGGSSEGLLAAQRTDCPYCDVKYDFYVS 2160 2161 CRGHLFSRQHLAKLKEAVRAQLKSESKCYDLAPAPEAPPALKAPPATTPASMPLGAAPTL 2220 2221 PRLAPVLLSGPALAQPPLGNLAPFNSGPAASSGLLGLATSVLPTTTVVQTAGPGRPLPQR 2280 2281 PMPDQTNTSTAGTTDPVPGPPTEPLGDKVSSERKPVAGPTSSSNDALKNLKALKTTVPAL 2340 2341 LGGQFLPFPLPPAGGTAPPAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNAL 2400 2401 LQPPPQPPEPTATAPPKPPELPAPGEGEAGEVDELLTGSTGISTVDVTHRYLCRQCKMAF 2460 2461 DGEAPATAHQRSFCFFGRGSGGSMPPPLRVPICTYHCLACEVLLSGREALASHLRSSAHR 2520 2521 RKAAPPQGGPPISITNAATAASAAVAFAKEEARLPHTDSNPKTTTTSTLLAL |
| Interface Residues: | 453, 464, 465, 466, 467, 470, 474, 487, 488, 491, 492, 493, 494, 495, 497, 498, 500, 501, 518, 519, 520, 521, 522, 524, 525, 580, 583, 586, 991, 992, 993, 994, 996, 997, 1020, 1022, 1023, 1202, 1204, 1205, 1208, 1232, 1233, 1258, 1259, 1260, 1261, 1262, 1264, 1265, 1595, 1596, 1597, 1598, 1599, 1637, 1638, 1640, 1641, 1644, 1645, 1648, 1649, 1652, 1858, 1861, 1902, 1903, 1906, 1907, 1910, 1911, 1914, 2066, 2067, 2068, 2069, 2107, 2110, 2111, 2114, 2115, 2117, 2118, 2119, 2122 |
| 3D-footprint Homologues: | 2kmk_A, 5kkq_D, 8ssq_A, 5yel_A, 8ssu_A, 5ei9_F, 6blw_A, 8gn3_A, 5k5l_F, 7w1m_H, 6e94_A, 6u9q_A, 5k5i_A, 6ml4_A, 7y3m_I, 2wbs_A, 3uk3_C, 7y3l_A, 8cuc_F, 2drp_D, 7ysf_A, 1g2f_F, 8h9h_G, 1llm_D, 7txc_E, 1f2i_J, 7n5w_A, 4x9j_A, 4j19_B, 1puf_A, 1ig7_A, 3cmy_A, 3d1n_M, 1nk2_P, 1zq3_P, 2ld5_A, 5zjt_E, 4cyc_A, 6es3_K, 4xrs_G, 8eml_B, 3lnq_A, 1puf_B, 5jlw_D, 7q3o_C, 3rkq_B, 8osb_E, 9b8u_A, 5flv_I, 2r5y_A, 2d5v_B, 1b72_A, 8bx1_A, 8ejp_B, 6ryd_F, 5hod_A, 1au7_A, 1e3o_C, 6wig_A, 1o4x_A, 1fjl_B, 6a8r_A, 5zfz_A, 8pmf_A, 6m3d_C, 2lkx_A, 1jgg_B, 7psx_B, 8ik5_C, 2hdd_A, 2hos_A, 7xrc_C, 2xsd_C, 1du0_A, 8g87_X, 4qtr_D |
| Binding Motifs: | M0893_1.02 vyTaATtArb |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.