Transcription Factor

						

			
Accessions: T102987_1.02 (CISBP 1.02)

			
Names: CAGL0H02959g, T102987_1.02;
Organisms: Candida glabrata
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 259
Pfam Domains:   163-218 Homeobox domain
  179-218 Homeobox KN domain
Sequence: 
(in bold interface residues)		   1 MESVQTTLPSIRSIIDSLSKDTETTGGRGVYDSNPRNVNYTDYNRQQNRLNLLDYQSLKD   60
  61 VPVKSSYSWGALPHEFKVTKPYHRSGKVNLVIRREESQPLSPPYSPNGSIGLSAAIPMKL  120
 121 CSSTSSSVSTTSTTTLTSVNSPPSSVSSSPSASSPEVGQGAVKKRANLPKETVKILNEWL  180
 181 YDHINNPYPTPQEKMELSLKTGLTKIQLSNWFINVRRRKVFADYYDITNQKRIVSAGVVK  240
 241 KQLPDASKRRTAMDRVHSS
Interface Residues: 164, 165, 209, 210, 213, 214, 215, 217, 218
3D-footprint Homologues: 6fqp_B, 5zjt_E, 1puf_B, 7q3o_C, 1le8_A, 8osb_E, 4qtr_D, 6es3_K, 2hdd_A, 1du0_A, 4xrm_B, 1le8_B, 1fjl_B, 4xrs_G, 1mnm_C, 6fqq_E, 3lnq_A, 1k61_B, 2hos_A
Binding Motifs: M1217_1.02 wsmyGTcAaa
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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