Transcription Factor
| Accessions: | T125588_1.02 (CISBP 1.02) |
| Names: | 1200010153, T125588_1.02; |
| Organisms: | Ostreococcus tauri |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Myb/SANT |
| Length: | 426 |
| Pfam Domains: | 370-419 Myb-like DNA-binding domain 372-425 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MPSSSKTAVDARASTRAELQRLLWALEHVLLLPDVPLASKLNVLKFVKRASGAEASGAFD 60 61 EELARRGALGLVKCAERTNGFTTLTASSASHCADDLCAYSKRRDANPSLAARAREIAERA 120 121 KAEYAFGQLRLGRDGFGASPVKESEARRGKASPVKQWRLVENFWLRWNDVRASDMFAEDG 180 181 KKLVGSKTREAYVFVEGAKKKGGKLPGSWETVVEDPAEILDAMGELFEDAVATFGKSFLS 240 241 LVVDDIQSGAYKVTMKKGLITDSGRVNASTVEAAMQRNSKVRERLAMDALEQSGDMFASP 300 301 PKKVHIAAERKANARTVEWNSQPDEGAAESPEPLATLPWDGFENTQAERTPRKRVSSPDP 360 361 KSPPRNGKQLRWTDVEVQALIRGVEKYGVGKWSYIMKDPTMFADFHPRRTSVDLKDKWRV 420 421 IAPKMI |
| Interface Residues: | 368, 369, 371, 411, 412, 415, 416, 419, 420 |
| 3D-footprint Homologues: | 3osg_A, 1vfc_A, 1w0t_A, 2qhb_A, 7c4r_A |
| Binding Motifs: | M1391_1.02 amCCCTArty |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.