Transcription Factor

						

			
Accessions: T074195_1.02 (CISBP 1.02)

			
Names: fgenesh1_pg.C_Chr_09.0001000301, T074195_1.02;
Organisms: Ostreococcus tauri
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:CxC
Length: 488
Pfam Domains:   160-198 Tesmin/TSO1-like CXC domain
  230-270 Tesmin/TSO1-like CXC domain
Sequence: 
(in bold interface residues)		   1 MSDIERLALSAEASIKRGSDVSGGRRASDVRRQSLEDDRYVLQNMYDEFDDSVLGVDERG   60
  61 SQPRTAGTREDLNGKRSSTTGASTEWTAGFTKTLKNFDVDSPRVGTRSARRTVVPPSRTA  120
 121 FEEYTPAVKNAQANAKQGGSATKISAQHSKNSSACREPVESKKCNCKKSKCLKLYCECFA  180
 181 AGAFCNDCSCQQCQNTVENVSVVEKTRSQIEARNPNAFLSKIEDDGDDARHTKGCHCKKS  240
 241 ACLKKYCECFQAGVKCQEYCKCEGCMNKEDAPPSSGPRGGSAKNGKASTQKTKAGRLAKT  300
 301 PIEVASELAARSIQDDLVIEDFKVFDKFGSPPRSFSHADDLSSEYSALNKSVEQSPLRTL  360
 361 LLSEGVQLSPFFSTSSLPQSALSPLRGAGYMSPLRPQLSPLRPSGFMSPITPGLRAGPGK  420
 421 YSIRSIGKAAVPLFNEDSGNSAGSREFKSPQDARTIGLGGWAHEVSKDGSFRATFTSPIP  480
 481 LKTPDVRE
Interface Residues: 175, 246, 439, 441
3D-footprint Homologues: 5fd3_A, 7o0h_A
Binding Motifs: M0598_1.02 rtwyramyk
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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