Transcription Factor

Accessions: P83949 (JASPAR 2024)
Names: UBX_DROME
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: P83949
Length:
Binding Motifs: MA0094.2 yTTAATKR
MA0094.1 TAAT
MA0094.3 TTAATKR
Binding Sites: MA0094.1.1
MA0094.1.10 / MA0094.1.8
MA0094.1.11
MA0094.1.12
MA0094.1.13
MA0094.1.14
MA0094.1.15 / MA0094.1.5
MA0094.1.16
MA0094.1.17
MA0094.1.18
MA0094.1.19
MA0094.1.2
MA0094.1.20
MA0094.1.3
MA0094.1.4
MA0094.1.6
MA0094.1.7
MA0094.1.9
MA0094.2.1
MA0094.2.10
MA0094.2.11
MA0094.2.12 / MA0094.2.17
MA0094.2.13
MA0094.2.14
MA0094.2.15
MA0094.2.16
MA0094.2.18
MA0094.2.19
MA0094.2.2
MA0094.2.20
MA0094.2.3 / MA0094.2.4
MA0094.2.5
MA0094.2.6
MA0094.2.7
MA0094.2.8
MA0094.2.9
MA0094.3.13 / MA0094.3.20 / MA0094.3.7
MA0094.3.1
MA0094.3.10
MA0094.3.11 / MA0094.3.14
MA0094.3.12 / MA0094.3.16 / MA0094.3.17
MA0094.3.15
MA0094.3.18
MA0094.3.19
MA0094.3.2
MA0094.3.3 / MA0094.3.4
MA0094.3.5 / MA0094.3.8
MA0094.3.6
MA0094.3.9
Publications: Ekker S. C., Young K. E., von Kessler D. P., Beachy P. A. Optimal DNA sequence recognition by the Ultrabithorax homeodomain of Drosophila. EMBO J. 10:1179-1186 (1991). [Pubmed]

Noyes M.B, Christensen R.G, Wakabayashi A, Stormo G.D, Brodsky M.H, Wolfe S.A. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133:1277-89 (2008). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.