Transcription Factor
| Accessions: | T14318 (AthalianaCistrome v4_May2016), Q93VI0 (JASPAR 2024) |
| Names: | AT3G09735, T14318;, S1FA3_ARATH |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1, JASPAR 2024 2 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:S1fa-like |
| Length: | 73 |
| Pfam Domains: | 5-73 DNA binding protein S1FA |
| Sequence: | MAAEFDGKIESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMK KEKMKQGVQVPGE |
| Binding Motifs: | M0730 rGAAgmTTCTAGAAr UN0379.1 kyTTCyAGAArc UN0379.2 TTCyAGAA |
| Binding Sites: | UN0379.2.15 / UN0379.2.16 / UN0379.2.4 / UN0379.2.5 / UN0379.2.6 / UN0379.2.7 UN0379.2.11 / UN0379.2.12 / UN0379.2.2 / UN0379.2.8 / UN0379.2.9 UN0379.1.1 UN0379.1.10 UN0379.1.11 UN0379.1.12 UN0379.1.11 / UN0379.1.13 / UN0379.1.18 / UN0379.1.9 UN0379.1.14 / UN0379.1.19 UN0379.1.15 UN0379.1.10 / UN0379.1.16 UN0379.1.17 UN0379.1.2 UN0379.1.12 / UN0379.1.20 UN0379.1.2 / UN0379.1.3 UN0379.1.4 UN0379.1.5 UN0379.1.6 UN0379.1.7 UN0379.1.8 UN0379.1.9 UN0379.1.16 UN0379.1.15 UN0379.1.3 UN0379.1.13 UN0379.1.17 UN0379.1.19 UN0379.1.20 UN0379.1.14 UN0379.1.18 UN0379.2.19 UN0379.2.20 UN0379.2.3 UN0379.2.10 / UN0379.2.13 UN0379.2.17 UN0379.2.14 UN0379.2.1 UN0379.2.18 |
| Related annotations: | PaperBLAST |
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