Transcription Factor
| Accessions: | T140052_1.02 (CISBP 1.02) |
| Names: | T140052_1.02;, tag-347 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:SAND |
| Length: | 424 |
| Pfam Domains: | 76-149 SAND domain |
| Sequence: (in bold interface residues) | 1 MFGGDVSAASVLPSHPISGSCDGFQAEGSDHHHSTMTPFQESQRNVYQILYGHPANDDFP 60 61 RPITPLQITIPEGDASPTVPVSCGVVNGKMHLNLFMCPGIHQPCIEVGNDLLSPKQFTIR 120 121 GDKERQKDWKASIRVGRSSLRTHMEAMTIDFYEHMNRCSGKCQSRNYVNAPSEEVLQARK 180 181 SKRTSEAGQLKYEIENEMAGKEADNDDNRKSAKKARGRPRGSVNKPRQMVKMEPQDDRFF 240 241 EEFFIDAPPLQSMSSNEEPTSSNKESNECTPFNDILNCLQNDPMNFWSQMQQTGVIGHFC 300 301 DDIIVSAINLKQSVMDNPVTPTTANMLTRTAFALGIPPVVVHRVQSIERNAYQQRKHDEM 360 361 FNDIQSTLAEEHSVKYQPRTSSSSQESLHTAREFTEEKVEELIDVCKYDDYPESECLPGP 420 421 SHIQ |
| Interface Residues: | 100 |
| 3D-footprint Homologues: | 4fm9_A, 6zy5_A |
| Binding Motifs: | M1542_1.02 htAAyrTTad |
| Related annotations: | PaperBLAST |
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