Transcription Factor

Accessions: AtMYB84 (AthaMYB 1.0)
Names: AtMYB84, Myb-related protein 84, Protein REGULATOR OF AXILLARY MERISTEMS 3, RAX3, Transcription factor RAX3
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9M2Y9
Length: 311
Pfam Domains: 14-62 Myb-like DNA-binding domain
17-76 Myb-like DNA-binding domain
69-111 Myb-like DNA-binding domain
71-121 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
61 YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120
121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180
181 NSFCDQEDVKPVLIKNMVKIEDQELEKTNPHHHQDSMTNAFDHLSFSQLLLDPNHNHLGS 240
241 GEGFSMNSILSANTNSPLLNTSNDNQWFGNFQAETVNLFSGASTSTSADQSTISWEDISS 300
301 LVYSDSKQFF*
Interface Residues: 14, 50, 51, 52, 53, 55, 56, 59, 60, 61, 102, 103, 106, 107, 110, 111, 112, 113
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A, 1puf_A
Binding Motifs: AtMYB84_I dbmrGTTr
AtMYB84_II TAGTTA
Binding Sites: ACAAGTTA
GTCAGTTA
TAGTTA
TGCGGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.