Transcription Factor

						

			
Accessions: T083557_1.02 (CISBP 1.02)

			
Names: FoxK, T083557_1.02;
Organisms: Strongylocentrotus purpuratus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Forkhead
Length: 679
Pfam Domains:    58-127 FHA domain
  256-351 Fork head domain
Sequence: 
(in bold interface residues)		   1 MATFRQATENDDAWALLALKSAPASPTRVPWNDGGQKGVILARLEGREFEYLIRKNRITV   60
  61 GRNSKQGEVDVNMGHSSFISRKHLEIICESPNFFLNCTGKNGIFVDGIFQRRGAAPLQLP  120
 121 RTCILRFPSTSIKIMFQALISESAPPAPVPPMQLQPTAPVVTKEPSPVKRKTMMPPLKID  180
 181 IPPSDATYASPYPSPTGTISAVNSCPTSPRAGTSQRSMLAPDLSAAAFAAAAAAAADDKE  240
 241 GHSSSNDVGGPRDETKPPYSYAQLIVQAIMSAQDKQLTLSGIYSYITKTYPYYRTADKGW  300
 301 QNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPGSEAKLMDQAYRRRRQRGVPCFRTPF  360
 361 SGVSSSRSAPSSPTHVPQFSGTFTPECLSREGSPAPQNMNNAGGGGEGQDHGPLDHQRFT  420
 421 QAMQEVKVSLVSPGSPITTTTGAQAASHAAHMAALPGGGGVIPLSSLALAGNPPPQGQGV  480
 481 PVVAIHPQMASVITSSRTQAAVQASLSNGHVTSSAGGFSHQAKDISSAGGGGGGSAEKNG  540
 541 IDMKVEEKPSVGVPPATIMLTQSHLKAANSSSTMVPQPAASSDSHHVVTVAGTFLPPASH  600
 601 YRPPPQLPMAGGYHHNMEMAPPQSSSQAATSSPLVMLATTSAVQQLQGHVKRPLDGIKEE  660
 661 TDGQDGFESKRIKTDPLEG
Interface Residues: 279, 296, 298, 299, 301, 302, 303, 305, 306, 307, 309, 310, 319, 326, 347, 351
3D-footprint Homologues: 8vfz_O, 3l2c_A, 8bzm_E, 7vox_H, 2hdc_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 7yzg_A, 7tdw_A, 3g73_A, 7yz7_A, 6el8_A, 7tdx_A, 7yzb_A, 6nce_A, 8sro_B, 3qrf_G
Binding Motifs: M0757_1.02 atrwmaAyAa
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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